Installation guide
Although the convenience of using the online public zenbu http://fantom.gsc.riken.jp/zenbu has many advantages, we understand that some users will want to install a local copy of ZENBU. This Installation guide is here to help you install a ZENBU server on your machine from source code. This guide will provide you with a working ZENBU server, but will not have a local copy of data. Data will be remotely shared dynamically from the RIKEN ZENBU server.
The ZENBU source code is available for download from our sourceforge page https://sourceforge.net/projects/zenbu ZENBU is written as a client/server or web2.0 designed system. It is written in c++ and perl for server-side web services and command line tools while the web clients are written in javascript.
The installation procedure requires several key steps
- phase1: basic server machine setup: apache, fastcgi, mysql server.
- phase2: compile and install ZENBU. including all c/c++ and perl library dependencies
- phase3: configuring the server
- creating support mysql databases
- editing the server configuration file
- phase4: loading data
- loading new genomes
- loading data via the command line
